173 research outputs found
Two-Dimensional Fluctuating Vesicles in Linear Shear Flow
The stochastic motion of a two-dimensional vesicle in linear shear flow is
studied at finite temperature. In the limit of small deformations from a
circle, Langevin-type equations of motion are derived, which are highly
nonlinear due to the constraint of constant perimeter length. These equations
are solved in the low temperature limit and using a mean field approach, in
which the length constraint is satisfied only on average. The constraint
imposes non-trivial correlations between the lowest deformation modes at low
temperature. We also simulate a vesicle in a hydrodynamic solvent by using the
multi-particle collision dynamics technique, both in the quasi-circular regime
and for larger deformations, and compare the stationary deformation correlation
functions and the time autocorrelation functions with theoretical predictions.
Good agreement between theory and simulations is obtained.Comment: 13 pages, 7 figure
Effective swimming strategies in low Reynolds number flows
The optimal strategy for a microscopic swimmer to migrate across a linear
shear flow is discussed. The two cases, in which the swimmer is located at
large distance, and in the proximity of a solid wall, are taken into account.
It is shown that migration can be achieved by means of a combination of sailing
through the flow and swimming, where the swimming strokes are induced by the
external flow without need of internal energy sources or external drives. The
structural dynamics required for the swimmer to move in the desired direction
is discussed and two simple models, based respectively on the presence of an
elastic structure, and on an orientation dependent friction, to control the
deformations induced by the external flow, are analyzed. In all cases, the
deformation sequence is a generalization of the tank-treading motion regimes
observed in vesicles in shear flows. Analytic expressions for the migration
velocity as a function of the deformation pattern and amplitude are provided.
The effects of thermal fluctuations on propulsion have been discussed and the
possibility that noise be exploited to overcome the limitations imposed on the
microswimmer by the scallop theorem have been discussed.Comment: 14 pages, 5 figure
Orexin Receptor Antagonism, a New Sleep-Enabling Paradigm: A Proof-of-Concept Clinical Trial
Peer reviewe
Dynamics of Fluid Vesicles in Oscillatory Shear Flow
The dynamics of fluid vesicles in oscillatory shear flow was studied using
differential equations of two variables: the Taylor deformation parameter and
inclination angle . In a steady shear flow with a low viscosity
of internal fluid, the vesicles exhibit steady tank-treading
motion with a constant inclination angle . In the oscillatory flow
with a low shear frequency, oscillates between or
around for zero or finite mean shear rate ,
respectively. As shear frequency increases, the vesicle
oscillation becomes delayed with respect to the shear oscillation, and the
oscillation amplitude decreases. At high with , another limit-cycle oscillation between and
is found to appear. In the steady flow, periodically rotates
(tumbling) at high , and and the vesicle shape
oscillate (swinging) at middle and high shear rate. In the
oscillatory flow, the coexistence of two or more limit-cycle oscillations can
occur for low in these phases. For the vesicle with a fixed shape,
the angle rotates back to the original position after an oscillation
period. However, it is found that a preferred angle can be induced by small
thermal fluctuations.Comment: 11 pages, 13 figure
Multi-Particle Collision Dynamics -- a Particle-Based Mesoscale Simulation Approach to the Hydrodynamics of Complex Fluids
In this review, we describe and analyze a mesoscale simulation method for
fluid flow, which was introduced by Malevanets and Kapral in 1999, and is now
called multi-particle collision dynamics (MPC) or stochastic rotation dynamics
(SRD). The method consists of alternating streaming and collision steps in an
ensemble of point particles. The multi-particle collisions are performed by
grouping particles in collision cells, and mass, momentum, and energy are
locally conserved. This simulation technique captures both full hydrodynamic
interactions and thermal fluctuations. The first part of the review begins with
a description of several widely used MPC algorithms and then discusses
important features of the original SRD algorithm and frequently used
variations. Two complementary approaches for deriving the hydrodynamic
equations and evaluating the transport coefficients are reviewed. It is then
shown how MPC algorithms can be generalized to model non-ideal fluids, and
binary mixtures with a consolute point. The importance of angular-momentum
conservation for systems like phase-separated liquids with different
viscosities is discussed. The second part of the review describes a number of
recent applications of MPC algorithms to study colloid and polymer dynamics,
the behavior of vesicles and cells in hydrodynamic flows, and the dynamics of
viscoelastic fluids
Exposure to Radiofrequency Electromagnetic Fields and Sleep Quality: A Prospective Cohort Study
BACKGROUND: There is persistent public concern about sleep disturbances due to radiofrequency electromagnetic field (RF-EMF) exposure. The aim of this prospective cohort study was to investigate whether sleep quality is affected by mobile phone use or by other RF-EMF sources in the everyday environment. METHODS: We conducted a prospective cohort study with 955 study participants aged between 30 and 60 years. Sleep quality and daytime sleepiness was assessed by means of standardized questionnaires in May 2008 (baseline) and May 2009 (follow-up). We also asked about mobile and cordless phone use and asked study participants for consent to obtain their mobile phone connection data from the mobile phone operators. Exposure to environmental RF-EMF was computed for each study participant using a previously developed and validated prediction model. In a nested sample of 119 study participants, RF-EMF exposure was measured in the bedroom and data on sleep behavior was collected by means of actigraphy during two weeks. Data were analyzed using multivariable regression models adjusted for relevant confounders. RESULTS: In the longitudinal analyses neither operator-recorded nor self-reported mobile phone use was associated with sleep disturbances or daytime sleepiness. Also, exposure to environmental RF-EMF did not affect self-reported sleep quality. The results from the longitudinal analyses were confirmed in the nested sleep study with objectively recorded exposure and measured sleep behavior data. CONCLUSIONS: We did not find evidence for adverse effects on sleep quality from RF-EMF exposure in our everyday environmen
Combined Simulation and Experimental Study of Large Deformation of Red Blood Cells in Microfluidic Systems
Author manuscript; available in PMC 2012 March 1.We investigate the biophysical characteristics of healthy human red blood cells (RBCs) traversing microfluidic channels with cross-sectional areas as small as 2.7 × 3 μm. We combine single RBC optical tweezers and flow experiments with corresponding simulations based on dissipative particle dynamics (DPD), and upon validation of the DPD model, predictive simulations and companion experiments are performed in order to quantify cell deformation and pressure–velocity relationships for different channel sizes and physiologically relevant temperatures. We discuss conditions associated with the shape transitions of RBCs along with the relative effects of membrane and cytosol viscosity, plasma environments, and geometry on flow through microfluidic systems at physiological temperatures. In particular, we identify a cross-sectional area threshold below which the RBC membrane properties begin to dominate its flow behavior at room temperature; at physiological temperatures this effect is less profound.Singapore-MIT Alliance for Research and TechnologyUnited States. National Institutes of Health (National Heart, Lung, and Blood Institute Award R01HL094270
In vivo biomolecular imaging of zebrafish embryos using confocal Raman spectroscopy
Zebrafish embryos provide a unique opportunity to visualize complex biological processes, yet conventional imaging modalities are unable to access intricate biomolecular information without compromising the integrity of the embryos. Here, we report the use of confocal Raman spectroscopic imaging for the visualization and multivariate analysis of biomolecular information extracted from unlabeled zebrafish embryos. We outline broad applications of this method in: (i) visualizing the biomolecular distribution of whole embryos in three dimensions, (ii) resolving anatomical features at subcellular spatial resolution, (iii) biomolecular profiling and discrimination of wild type and ΔRD1 mutant Mycobacterium marinum strains in a zebrafish embryo model of tuberculosis and (iv) in vivo temporal monitoring of the wound response in living zebrafish embryos. Overall, this study demonstrates the application of confocal Raman spectroscopic imaging for the comparative bimolecular analysis of fully intact and living zebrafish embryos
Corrigendum to “A systematic strategy for estimating hERG block potency and its implications in a new cardiac safety paradigm” [Toxicology and Applied Pharmacology volume 394C (2020) 114961]
© 2020 The Author(s) The authors regret that one affiliation address is mistaken in the published paper. Matthew Bridgland-Taylor's affiliation was incorrectly listed as Clinical Pharmacology & Safety Sciences, R&D, AstraZeneca, Cambridge, United Kingdom. The correct affiliation is Clinical Pharmacology & Safety Sciences, BioPharmaceuticals R&D, AstraZeneca, Cambridge, United Kingdom. The authors would like to apologise for any inconvenience caused
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